63 lines
1.5 KiB
Markdown
63 lines
1.5 KiB
Markdown
# Project State
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## Project Reference
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See: .planning/PROJECT.md (updated 2026-02-11)
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**Core value:** Produce a high-confidence, multi-evidence-backed ranked list of under-studied cilia/Usher candidate genes that is fully traceable — every gene's inclusion is explainable by specific evidence, and every gap is documented.
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**Current focus:** Phase 1 - Data Infrastructure
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## Current Position
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Phase: 1 of 6 (Data Infrastructure)
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Plan: 0 of TBD in current phase
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Status: Ready to plan
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Last activity: 2026-02-11 — Roadmap created with 6 phases covering all 40 v1 requirements
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Progress: [░░░░░░░░░░] 0%
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## Performance Metrics
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**Velocity:**
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- Total plans completed: 0
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- Average duration: - min
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- Total execution time: 0.0 hours
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**By Phase:**
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| Phase | Plans | Total | Avg/Plan |
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|-------|-------|-------|----------|
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| - | - | - | - |
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**Recent Trend:**
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- Last 5 plans: None yet
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- Trend: No data
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*Updated after each plan completion*
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## Accumulated Context
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### Decisions
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Decisions are logged in PROJECT.md Key Decisions table.
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Recent decisions affecting current work:
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- Python over R/Bioconductor for rich data integration ecosystem
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- Weighted rule-based scoring over ML for explainability
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- Public data only for reproducibility
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- Modular CLI scripts for flexibility during development
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### Pending Todos
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None yet.
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### Blockers/Concerns
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None yet.
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## Session Continuity
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Last session: 2026-02-11 - Roadmap creation
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Stopped at: Roadmap and STATE files initialized, ready to plan Phase 1
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Resume file: None
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