gbanyan
dc36730cb4
- Revised .gitignore to ignore raw data/cache but track data/report/ (candidates TSV/Parquet, plots, reproducibility metadata) - Added zh↔en cross-links between README.md and README.en.md Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
46 lines
893 B
Markdown
46 lines
893 B
Markdown
# Pipeline Reproducibility Report
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**Run ID:** `5f00f9da-e548-4a58-b1b3-028d05c94d32`
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**Timestamp:** 2026-02-12T18:43:00.223842+00:00
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**Pipeline Version:** 0.1.0
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## Parameters
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**Scoring Weights:**
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- gnomAD: 0.20
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- Expression: 0.20
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- Annotation: 0.15
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- Localization: 0.15
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- Animal Model: 0.15
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- Literature: 0.15
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## Data Versions
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- **ensembl_release:** 113
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- **gnomad_version:** v4.1
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- **gtex_version:** v8
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- **hpa_version:** 23.0
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## Software Environment
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- **python:** 3.14.3
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- **polars:** 1.38.1
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- **duckdb:** 1.4.4
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## Filtering Steps
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| Step | Input Count | Output Count | Criteria |
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|------|-------------|--------------|----------|
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| load_scored_genes | 0 | 0 | |
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| apply_tier_classification | 0 | 0 | |
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| write_candidate_output | 0 | 0 | |
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| generate_visualizations | 0 | 0 | |
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## Tier Statistics
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- **Total Candidates:** 18116
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- **HIGH:** 0
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- **MEDIUM:** 2151
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- **LOW:** 15965
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