usher-exploring

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gbanyan d2ef3a2b84 feat(05-01): implement tiering logic and evidence summary module

- Add confidence tier classification (HIGH/MEDIUM/LOW) based on composite_score and evidence_count
- Add supporting_layers and evidence_gaps columns per gene
- Use vectorized polars expressions for performance
- Configurable thresholds for tier assignment

2026-02-12 03:56:42 +08:00

.planning

docs(05-output-cli): create phase plan

2026-02-11 21:14:37 +08:00

config

feat(01-01): create Python package scaffold with config system

2026-02-11 16:24:35 +08:00

src/usher_pipeline

feat(05-01): implement tiering logic and evidence summary module

2026-02-12 03:56:42 +08:00

tests

test(04-03): add unit and integration tests for scoring module