gbanyan 71c4e8f736 docs(04-01): complete known gene compilation and weighted scoring plan ...

- Known genes: 38 (10 OMIM Usher + 28 SYSCILIA SCGS v2 core)
- ScoringWeights.validate_sum() enforcing weight sum = 1.0
- NULL-preserving weighted average (weighted_sum / available_weight)
- Quality flags based on evidence_count thresholds
- Per-layer contributions for explainability
- 2 tasks, 4 files, 4 min duration

2026-02-11 20:44:09 +08:00

.planning

docs(04-01): complete known gene compilation and weighted scoring plan

2026-02-11 20:44:09 +08:00

config

feat(01-01): create Python package scaffold with config system

2026-02-11 16:24:35 +08:00

src/usher_pipeline

feat(04-01): implement multi-evidence weighted scoring integration

2026-02-11 20:41:44 +08:00

tests

docs(03-04): complete subcellular localization evidence layer

2026-02-11 19:08:01 +08:00

.gitignore

feat(01-04): add CLI entry point with setup and info commands

2026-02-11 16:39:50 +08:00

pyproject.toml

feat(03-06): implement literature evidence models, PubMed fetch, and scoring

2026-02-11 19:00:20 +08:00

Description

No description provided

1.3 MiB

Languages

Python 100%