gbanyan
dc36730cb4
- Revised .gitignore to ignore raw data/cache but track data/report/ (candidates TSV/Parquet, plots, reproducibility metadata) - Added zh↔en cross-links between README.md and README.en.md Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
58 lines
746 B
Plaintext
58 lines
746 B
Plaintext
# === Raw data & intermediate files ===
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data/cache/
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data/gnomad/
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data/annotation/
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data/expression/
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data/localization/
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data/animal_models/
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data/scoring/
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# DuckDB database (large, regeneratable)
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*.duckdb
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*.duckdb.wal
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# Provenance JSON (regenerated on each run)
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*.provenance.json
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*.provenance.provenance.json
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# === Keep report results ===
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# data/report/ is NOT ignored — candidates.tsv, parquet, plots are tracked
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# === Python ===
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__pycache__/
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*.pyc
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*.pyo
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*.pyd
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.Python
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*.so
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*.egg
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*.egg-info/
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dist/
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build/
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.eggs/
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# === Testing ===
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.pytest_cache/
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.coverage
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htmlcov/
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.tox/
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# === IDE ===
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.vscode/
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.idea/
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*.swp
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*.swo
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*~
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# === Virtual environment ===
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.venv/
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venv/
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env/
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# === OS ===
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.DS_Store
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Thumbs.db
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# === Planning (internal) ===
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.planning/
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