usher-exploring

Go to file

gbanyan 0f615c0d53 feat(06-01): add recall@k metrics and extended positive control validation

- compute_recall_at_k() measures recall at absolute (100, 500, 1000, 2000) and percentage (5%, 10%, 20%) thresholds
- validate_positive_controls_extended() combines percentile + recall + per-source metrics
- Per-source breakdown separates OMIM Usher from SYSCILIA SCGS v2 validation
- Export all new functions in __init__.py including negative control imports

2026-02-12 04:41:00 +08:00

.planning

docs(06): create phase plan

2026-02-12 04:33:17 +08:00

config

feat(01-01): create Python package scaffold with config system

2026-02-11 16:24:35 +08:00

src/usher_pipeline

feat(06-01): add recall@k metrics and extended positive control validation

2026-02-12 04:41:00 +08:00

tests

test(05-03): add CliRunner integration tests for report command