pdf_signature_extraction/paper/paper_a_appendix_v3.md

# Appendix A. BD/McCrary Bin-Width Sensitivity (Signature Level)

The main text (Section III-I, Section IV-D.2) treats the Burgstahler-Dichev / McCrary discontinuity procedure [38], [39] as a *density-smoothness diagnostic* rather than as a threshold estimator.
This appendix documents the empirical basis for that framing by sweeping the bin width across four (variant, bin-width) panels: Firm A and full-sample, each in the cosine and $\text{dHash}_\text{indep}$ direction.

<!-- TABLE A.I: BD/McCrary Bin-Width Sensitivity (two-sided alpha = 0.05, |Z| > 1.96)
| Variant | n | Bin width | Best transition | z_below | z_above |
|---------|---|-----------|-----------------|---------|---------|
| Firm A cosine (sig-level)        | 60,448  | 0.003  | 0.9870 | -2.81  | +9.42   |
| Firm A cosine (sig-level)        | 60,448  | 0.005  | 0.9850 | -9.57  | +19.07  |
| Firm A cosine (sig-level)        | 60,448  | 0.010  | 0.9800 | -54.64 | +69.96  |
| Firm A cosine (sig-level)        | 60,448  | 0.015  | 0.9750 | -85.86 | +106.17 |
| Firm A dHash_indep (sig-level)   | 60,448  | 1      | 2.0    | -4.69  | +10.01  |
| Firm A dHash_indep (sig-level)   | 60,448  | 2      | no transition | — | — |
| Firm A dHash_indep (sig-level)   | 60,448  | 3      | no transition | — | — |
| Full-sample cosine (sig-level)   | 168,740 | 0.003  | 0.9870 | -3.21  | +8.17   |
| Full-sample cosine (sig-level)   | 168,740 | 0.005  | 0.9850 | -8.80  | +14.32  |
| Full-sample cosine (sig-level)   | 168,740 | 0.010  | 0.9800 | -29.69 | +44.91  |
| Full-sample cosine (sig-level)   | 168,740 | 0.015  | 0.9450 | -11.35 | +14.85  |
| Full-sample dHash_indep (sig-l.) | 168,740 | 1      | 2.0    | -6.22  | +4.89   |
| Full-sample dHash_indep (sig-l.) | 168,740 | 2      | 10.0   | -7.35  | +3.83   |
| Full-sample dHash_indep (sig-l.) | 168,740 | 3      | 9.0    | -11.05 | +45.39  |
-->

Two patterns are visible in Table A.I.
First, the procedure consistently identifies a "transition" under every bin width, but the *location* of that transition drifts monotonically with bin width (Firm A cosine: 0.987 → 0.985 → 0.980 → 0.975 as bin width grows from 0.003 to 0.015; full-sample dHash: 2 → 10 → 9 as the bin width grows from 1 to 3).
The $Z$ statistics also inflate superlinearly with the bin width (Firm A cosine $|Z|$ rises from $\sim 9$ at bin 0.003 to $\sim 106$ at bin 0.015) because wider bins aggregate more mass per bin and therefore shrink the per-bin standard error on a very large sample.
Both features are characteristic of a histogram-resolution artifact rather than of a genuine density discontinuity.

Second, the candidate transitions all locate *inside* the non-hand-signed mode (cosine $\geq 0.975$, dHash $\leq 10$) rather than between modes, which is the location pattern we would expect of a clean two-mechanism boundary.

Taken together, Table A.I shows that the signature-level BD/McCrary transitions are not a threshold in the usual sense---they are histogram-resolution-dependent local density anomalies located *inside* the non-hand-signed mode rather than between modes.
This observation supports the main-text decision to use BD/McCrary as a density-smoothness diagnostic rather than as a threshold estimator and reinforces the joint reading of Section IV-D that per-signature similarity does not form a clean two-mechanism mixture.

Raw per-bin $Z$ sequences and $p$-values for every (variant, bin-width) panel are available in the supplementary materials.

# Appendix B. Table-to-Script Provenance

For reproducibility, the following table maps each numerical table in Section IV to the analysis script that produces its underlying values and to the report file emitted by that script. Scripts are under `signature_analysis/`. Report artifact paths below are listed relative to the project's analysis report root, which is `/Volumes/NV2/PDF-Processing/signature-analysis/` in our local deployment; replicators should rebase the paths to whatever report root they configure when invoking the scripts.

<!-- TABLE B.I: Manuscript table → reproduction artifact
| Manuscript table | Generating script | Report artifact |
|------------------|-------------------|-----------------|
| Table III (extraction results) | `02_extract_features.py`; `09_pdf_signature_verdict.py` | `reports/extraction_methodology.md`; `reports/pdf_signature_verdicts.json` |
| Table IV (intra/inter all-pairs cosine statistics) | `10_formal_statistical_analysis.py` | `reports/formal_statistical_data.json`; `reports/formal_statistical_report.md` |
| Table V (Hartigan dip test) | `15_hartigan_dip_test.py` | `reports/dip_test/dip_test_results.json` |
| Table VI (signature-level threshold-estimator summary) | `17_beta_mixture_em.py`; `25_bd_mccrary_sensitivity.py` | `reports/beta_mixture/beta_mixture_results.json`; `reports/bd_sensitivity/bd_sensitivity.json` |
| Table IX (Firm A whole-sample capture rates) | `19_pixel_identity_validation.py`; `24_validation_recalibration.py` | `reports/pixel_validation/pixel_validation_results.json`; `reports/validation_recalibration/validation_recalibration.json` |
| Table X (cosine threshold sweep, FAR vs inter-CPA negatives) | `21_expanded_validation.py` | `reports/expanded_validation/expanded_validation_results.json` |
| Table XI (held-out vs calibration Firm A capture rates) | `24_validation_recalibration.py` | `reports/validation_recalibration/validation_recalibration.json` |
| Table XII (operational-cut sensitivity 0.95 vs 0.945) | `24_validation_recalibration.py` | `reports/validation_recalibration/validation_recalibration.json` |
| Table XIII (Firm A per-year cosine distribution) | `29_firm_a_yearly_distribution.py` | `reports/firm_a_yearly/firm_a_yearly_distribution.json` |
| Tables XIV / XV (partner-level similarity ranking) | `22_partner_ranking.py` | `reports/partner_ranking/partner_ranking_results.json` |
| Table XVI (intra-report classification agreement) | `23_intra_report_consistency.py` | `reports/intra_report/intra_report_results.json` |
| Table XVII (document-level five-way classification) | `09_pdf_signature_verdict.py`; `12_generate_pdf_level_report.py` | `reports/pdf_signature_verdicts.json`; `reports/pdf_signature_verdict_report.md` (CSV / XLSX bulk reports also at `reports/`) |
| Table XVIII (backbone ablation) | `paper/ablation_backbone_comparison.py` | `ablation/ablation_results.json` (sibling of `reports/`) |
| Table A.I (BD/McCrary bin-width sensitivity) | `25_bd_mccrary_sensitivity.py` | `reports/bd_sensitivity/bd_sensitivity.json` |
| Byte-identity decomposition (145 / 50 / 180 / 35; Section IV-F.1) | `28_byte_identity_decomposition.py` | `reports/byte_identity_decomp/byte_identity_decomposition.json` |
| Cross-firm dual-descriptor convergence (Section IV-H.2) | `28_byte_identity_decomposition.py` | `reports/byte_identity_decomp/byte_identity_decomposition.json` |
-->

The table-to-script mapping above is intended as a navigation aid for replicators. All scripts run deterministically under the fixed random seeds documented in the supplementary materials; the artifact paths above were verified against the local deployment at the time of submission, and any reviewer reproduction step should re-emit the artifacts from the listed scripts rather than depend on the absolute path layout.