gbanyan
dc36730cb4
- Revised .gitignore to ignore raw data/cache but track data/report/ (candidates TSV/Parquet, plots, reproducibility metadata) - Added zh↔en cross-links between README.md and README.en.md Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com>
893 B
893 B
Pipeline Reproducibility Report
Run ID: 5f00f9da-e548-4a58-b1b3-028d05c94d32
Timestamp: 2026-02-12T18:43:00.223842+00:00
Pipeline Version: 0.1.0
Parameters
Scoring Weights:
- gnomAD: 0.20
- Expression: 0.20
- Annotation: 0.15
- Localization: 0.15
- Animal Model: 0.15
- Literature: 0.15
Data Versions
- ensembl_release: 113
- gnomad_version: v4.1
- gtex_version: v8
- hpa_version: 23.0
Software Environment
- python: 3.14.3
- polars: 1.38.1
- duckdb: 1.4.4
Filtering Steps
| Step | Input Count | Output Count | Criteria |
|---|---|---|---|
| load_scored_genes | 0 | 0 | |
| apply_tier_classification | 0 | 0 | |
| write_candidate_output | 0 | 0 | |
| generate_visualizations | 0 | 0 |
Tier Statistics
- Total Candidates: 18116
- HIGH: 0
- MEDIUM: 2151
- LOW: 15965