294b4defbb
docs(phase-06): complete phase execution
2026-02-12 04:57:56 +08:00
c97592d629
docs(06-03): complete comprehensive validation report & CLI plan
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- Created 06-03-SUMMARY.md documenting plan execution
- Updated STATE.md:
- Current Position: Phase 6 COMPLETE (21/21 plans)
- Performance Metrics: Phase 06 3/3 plans, 10 min total, 3.3 min/plan avg
- Added decisions for comprehensive validation report and weight tuning recommendations
- Session Continuity: Stopped at 06-03-PLAN.md completion
Co-Authored-By: Claude Opus 4.6 <noreply@anthropic.com >
2026-02-12 04:53:05 +08:00
2d29f43848
docs(06-02): complete sensitivity analysis plan
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- Create SUMMARY.md with implementation details and verification results
- Update STATE.md: progress 100% (20/20 plans), plan 06-02 complete
- Record decisions: perturbation deltas, stability threshold, renormalization
- All tasks completed with 2 commits in 3 minutes
2026-02-12 04:44:13 +08:00
a2d6e97acf
docs(06-01): complete negative controls and recall@k validation plan
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Summary:
- Created negative_controls.py with 13 housekeeping genes
- Added recall@k metrics (absolute and percentage thresholds)
- Added per-source breakdown for OMIM vs SYSCILIA
- Updated STATE.md with Phase 6 progress and decisions
Plan Summary: .planning/phases/06-validation/06-01-SUMMARY.md
2026-02-12 04:43:59 +08:00
844295c681
docs(06): create phase plan
2026-02-12 04:33:17 +08:00
ca2b715d8e
docs(phase-06): research validation domain with controls and sensitivity analysis
2026-02-12 04:27:26 +08:00
