# Project State

## Project Reference

See: .planning/PROJECT.md (updated 2026-02-12)

**Core value:** Produce a high-confidence, multi-evidence-backed ranked list of under-studied cilia/Usher candidate genes that is fully traceable — every gene's inclusion is explainable by specific evidence, and every gap is documented.
**Current focus:** v1.0 MVP shipped — planning next milestone

## Current Position

Milestone: v1.0 MVP — SHIPPED 2026-02-12
Status: All 6 phases complete, 21/21 plans, audited and archived

## Performance Metrics

**v1.0 Velocity:**
- Total plans completed: 21
- Average duration: 4.6 min/plan
- Total execution time: ~1.6 hours
- Lines of code: 21,183 Python

| Phase | Plans | Total | Avg/Plan |
|-------|-------|-------|----------|
| 01 - Data Infrastructure | 4/4 | 14 min | 3.5 min |
| 02 - Prototype Evidence Layer | 2/2 | 8 min | 4.0 min |
| 03 - Core Evidence Layers | 6/6 | 52 min | 8.7 min |
| 04 - Scoring Integration | 3/3 | 10 min | 3.3 min |
| 05 - Output & CLI | 3/3 | 12 min | 4.0 min |
| 06 - Validation | 3/3 | 10 min | 3.3 min |

## Accumulated Context

### Decisions

All v1.0 decisions documented in PROJECT.md Key Decisions table.

### Pending Todos

None.

### Blockers/Concerns

None.

## Session Continuity

Last session: 2026-02-12 — v1.0 milestone completed and archived
Next action: /gsd:new-milestone for v1.1 or v2.0
